services


All of our software is available under a free license for academic use.
For commercial use, please contact biocomputing.biomed@unipd.it.
Visit our download page to obtain a locally executable version of our services or try our GitHub page.

Web service
Align 2.0
Pairwise protein sequence alignment and analysis server
Sequence
Web service
APICURON
A database to credit and acknowledge the work of biocurators
Biocuration
Web service
Bluues
Electrostatic properties of proteins based on generalized Born radii
Structure
Tools
BOOGIE
Blood group predictor from high throughput sequencing data
FunctionSequence
Web service
CAID Prediction Portal
Use CAID predictors to predict disorder and binding content of a protein
BindingDisorder
Database
DisProt
A database of manually curated disordered protein regions
DisorderFunction
Web service
ESpritz
Disorder predictor for high-throughput applications, including NMR mobility
Disorder
Web service
FELLS
A fast estimator of latent local structure
DisorderSequenceStructure
Tools
FESS
A Fast Estimator of Secondary Structure
SequenceStructure
Tools
FLIPPER
A Fast Linear Interacting Peptides Predictor
DisorderStructure
Tools
FRST
Protein model quality estimation method based on energy evaluation
Structure
Database
FuzDB
A database of experimentally observed fuzzy protein complexes
Disorder
Web service
FuzDrop
A method for predicting liquid-liquid phase separation in proteins
Disorder
Web service
FuzPred
A method for predicting the context-dependent binding behaviour of proteins
Disorder
Web service
INGA
Interaction Network Go Annotator for protein function prediction
FunctionSequence
Tools
Mobi 2.0
Intrinsic disorder detection in PDB structures
Disorder
Database
MobiDB
A database of protein disorder and mobility annotations
Disorder
Tools
MobiDB-lite
Highly specific predictions of long intrinsically disordered regions
Disorder
Library
Mocafe
A Python package based on FEniCS to develop and simulate Phase Field mathematical models for cancer
ModelingNetwork
Web service
NeEMO
Network Enthalpic MOdelling evaluation of stability changes
SequenceStructure
Library
ngx-mol-viewers
Three components for Angular developers
ModelingSequence
Web service
PASTA2
Prediction of Amyloid STructure Aggregation
Aggregation
Database
PED
A deposition database for structural assemblies
DisorderStructure
Database
PhytoTypeDB
A database for plant protein function and variability
FunctionSequenceStructure
Library
ProSeqViewer
A TypeScript library to visualize annotation on single sequences and multiple sequence alignments
FunctionSequence
Web service
QMEAN
Protein model quality estimation based on a comprehensive evaluation
ModelingStructure
Web service
Raphael
Determination of periodicity in protein structures
Repeats
Database
RepeatsDB
A database of tandem repeat protein annotations
Repeats
Web service
RepeatsDB-lite
Prediction of repetitive structural elements and units in tandem repeat proteins
Repeats
Web service
RING
Residue interaction network generator from structure
Network
Tools
RING-PyMOL
Combines residue interaction networks from RING with structural clustering for the analysis and visualization of the conformational complexity
Network
Web service
Rubi
Detect regions of proteins which are thought to contain ubiquitinated lysines
Sequence
Web service
SODA
Protein solubility based on disorder and aggregation
AggregationDisorderSequenceStructure
Tools
TAP
Validate local torsion angles for protein structures
Structure
Library
TypeScript Feature Viewer
A TypeScript library for the visualization of biological sequence features
FunctionSequence
Database
VHLdb
A database of interactors and mutations of the Human pVHL
FunctionSequence
Library
Victor
Virtual Construction Toolkit for Proteins
ModelingSequenceStructure